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  4. Protocol to stimulate and delineate alternative lengthening of telomeres in human U2OS cells

Protocol to stimulate and delineate alternative lengthening of telomeres in human U2OS cells

STAR Protocols, 2022 · DOI: https://doi.org/10.1016/j.xpro.2022.101594 · Published: September 16, 2022

Genetics

Simple Explanation

This protocol describes how to stimulate the formation of ALT-associated PML bodies (APBs) and ALT activity by tethering PML-IV to telomeres in human U2OS cells. The method involves using an ABA-inducible system to tether PML-IV to telomeres, promoting APB formation, and then visualizing proteins and DNA synthesis in APBs using techniques like immunofluorescence and fluorescence in situ hybridization. This allows researchers to analyze telomere clustering dynamics, observe the recruitment of DNA repair proteins to APBs, and measure telomere DNA synthesis during alternative lengthening of telomeres (ALT).

Study Duration
Not specified
Participants
Human U2OS cells expressing PYL1-TagRFP-TRF1 and ABI-EGFP-PML-IV
Evidence Level
Not specified

Key Findings

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    ABA-dependent tethering of PML-IV to telomeres induces telomere clustering.
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    BLM, a protein critical for ALT, is colocalized with telomeres after 14 h ABA treatment.
  • 3
    Telomere DNA synthesis in non-S phase cells is enhanced by ABA.

Research Summary

Alternative lengthening of telomeres (ALT) is a telomerase-independent but recombination-dependent pathway that maintains telomeres. Here, we describe a protocol to stimulate the formation of ALT-associated PML bodies (APBs) and ALT activity by tethering PML-IV to telomeres in human U2OS cells. This protocol provides a unique approach to delineate the ALT pathway.

Practical Implications

Study Protein Localization

This assay can be used to study the localization of proteins of interest to APBs.

Analyze ALT Events

This assay can also be used to analyze the specific ALT events occurring in APBs.

Test Protein Contributions

This assay can be used to test the contributions of specific proteins or their activities to ALT telomere synthesis in APBs.

Study Limitations

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