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  4. Multiomics identify the gene expression signature of the spinal cord during aging process

Multiomics identify the gene expression signature of the spinal cord during aging process

Communications Biology, 2025 · DOI: https://doi.org/10.1038/s42003-025-07475-4 · Published: January 7, 2025

AgingNeurologyGenetics

Simple Explanation

This study investigates the aging process in the spinal cord by examining gene expression changes. Using advanced techniques like spatial transcriptomics and RNA sequencing, researchers compared young and aged spinal cords to identify key genes and pathways involved in senescence. The research highlights the role of a gene called Fth1, which is associated with ferroptosis (a form of cell death). They found that Fth1 is upregulated in aged spinal cords, making cells more resistant to ferroptosis, a process that could contribute to age-related decline. The findings suggest that resistance to ferroptosis could be a significant characteristic of aging, not just in the spinal cord but potentially in other tissues as well. This could open new avenues for developing treatments to combat age-related disabilities.

Study Duration
Not specified
Participants
Young (3 months of age) and aged (24 months of age) Sprague Dawley rats, primary mixed glial cells from newborn rats, cynomolgus monkeys
Evidence Level
Not specified

Key Findings

  • 1
    Bulk RNA sequencing identified 526 upregulated genes and 300 downregulated genes in senescent spinal cords compared to young spinal cords, with pathways related to phagosome function, neuroinflammation, ferroptosis, and necroptosis being enriched.
  • 2
    Spatial transcriptomics revealed distinct neuronal and glial subtypes in young and senescent spinal cords, and showed that the ferroptosis-associated gene Fth1 is upregulated in aged spinal cords.
  • 3
    In vitro experiments demonstrated that senescent mixed glial cells are resistant to ferroptosis, and that overexpression of Fth1 in normal mixed glial cells reduces their sensitivity to ferroptosis, while Fth1 knockdown increases their sensitivity.

Research Summary

This study provides a spatiotemporal atlas of young and aged spinal cord tissues using spatial transcriptomics, revealing changes in gene expression between grey and white matter regions. Integration with bulk RNA sequencing data showed enrichment of ferroptosis-associated genes, particularly Fth1, in aged spinal cords. Further experiments indicated that ferroptosis resistance, evidenced by elevated Fth1 expression, develops with aging. Senescent cells exhibited resistance to ferroptosis, suggesting this may be a significant biological trait of senescence beyond the central nervous system. The research identified Spi1 as a central regulator in aged spinal cords and highlighted that Fth1 upregulation may enable cells to tolerate iron loads and become less sensitive to ferroptosis.

Practical Implications

Therapeutic Targets

Fth1 may be a potential therapeutic target for interventions aimed at modulating ferroptosis sensitivity in age-related spinal cord degeneration.

Biomarker Development

The identified gene expression signatures could be used to develop biomarkers for assessing the progression of spinal cord aging and related disabilities.

Understanding Senescence

The study contributes to a broader understanding of cellular senescence and its role in age-related diseases, which could inform the development of novel regenerative strategies.

Study Limitations

  • 1
    The role of Spi1 as a potential core regulatory factor in spinal cord ageing requires further validation.
  • 2
    The ST samples were limited and had coarse spatial resolution, which hinders the precise classification of certain cell subtypes.
  • 3
    The upstream and downstream regulatory mechanisms of Fth1 in senescent spinal cord tissue require further investigation.

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